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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LIHC rs11642999 chr16:90118119 C/T 8.59E-5 192 13.92 12.13 2.17 KM Plot
LIHC rs11644804 chr16:89976224 G/A 4.64E-7 187 14.18 10.93 2.2 KM Plot
LIHC rs11647027 chr16:90074213 A/C 0.000112 192 13.85 12.5 4.8 KM Plot
LIHC rs116502881 chr2:202238563 C/T 0 189 13.35 13.38 0.37 KM Plot
LIHC rs11708006 chr3:125397537 C/T 0 189 13.53 13.8 0.75 KM Plot
LIHC rs11708186 chr3:125382944 T/A 0.000392 192 13.73 12.5 1.03 KM Plot
LIHC rs11708269 chr3:125332150 C/T 0 187 13.58 13.17 0.75 KM Plot
LIHC rs11711150 chr3:125315663 C/T 0.000332 189 13.73 12.1 1.03 KM Plot
LIHC rs11711287 chr3:10326096 G/A 1.89E-5 192 13.6 13.63 0.2 KM Plot
LIHC rs11712579 chr3:10297597 G/A 2.76E-5 188 13.13 13.85 0.2 KM Plot
LIHC rs11716841 chr3:10324188 A/T 1.84E-5 192 13.72 13.53 0.2 KM Plot
LIHC rs11717632 chr3:125321130 G/C 0.000332 189 13.73 12.1 1.03 KM Plot
LIHC rs11718213 chr3:10325950 G/T 1.89E-5 192 0.2 13.63 13.6 KM Plot
LIHC rs11718465 chr3:10313470 C/T 1.84E-5 191 13.9 13.35 0.2 KM Plot
LIHC rs11726912 chr4:887868 A/C 2.52E-9 192 13.87 7.57 0.32 KM Plot